I am trying to build duckdb 1.3.1 from source on an AWS ARM ubuntu instance. The compile goes well, if slowly, until the end when the binary is ready to be put in the site-library
. Then it fails with "No space left on device." The The R package install tips for this distro discuss out-of-memory issues, but I don't have that problem. The last part of the log is below:
installing via 'install.libs.R' to /usr/local/lib/R/site-library/00LOCK-duckdb/0 ** R
Warning in dir.create(outCodeDir) :
cannot create dir '/usr/local/lib/R/site-library/00LOCK-duckdb/00new/duckdb/R'
reason 'No space left on device'
Error in .install_package_code_files(".", instdir) :
cannot open directory '/usr/local/lib/R/site-library/00LOCK-duckdb/00new/duckd b/R'
ERROR: unable to collate and parse R files for package ‘duckdb’
* removing ‘/usr/local/lib/R/site-library/duckdb’
The downloaded source packages are in
‘/tmp/RtmpRrLkVk/downloaded_packages’
Warning message:
In install.packages("duckdb") :
installation of package ‘duckdb’ had non-zero exit status
>
I have 8Gb of storage. This is the df
before and after the failed install:
Filesystem 1K-blocks Used Available Use% Mounted on
/dev/root 7034376 4563456 2454536 66% /
tmpfs 1961888 0 1961888 0% /dev/shm
tmpfs 784756 988 783768 1% /run
tmpfs 5120 0 5120 0% /run/lock
efivarfs 128 4 125 3% /sys/firmware/efi/efivars
/dev/nvme0n1p16 911580 107364 740576 13% /boot
/dev/nvme0n1p15 99791 6475 93317 7% /boot/efi
tmpfs 392376 16 392360 1% /run/user/1000
What seems crazy is that, during the build, the temporary files in /tmp
swell to over 1Gb! If the disk full error is valid, /tmp
must get to over 2Gb since I started with 2.4Gb of free space. The CLI binary only works out to 66Mb so I assume that's additional disk space I'd need when all is complete.
FWIW, Here is what I put in ~/.R/Makevars
, though it's presence doesn't seem to make a difference.
MAKEFLAGS = -j$(nproc)
CXXFLAGS += -march=armv8-a
LDFLAGS += -march=armv8-a
Any ideas on how to make this succeed? Thanks.
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